SMTL ID : 5c1y.1

Crystal structure of EV71 3C Proteinase in complex with Compound 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

monomer

Ligands

1 x GHY: propan-2-yl N-[(2S)-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate(Covalent)

GHY.1: 13 residues within 4Å: Chain A: R.40, H.41, E.72, L.128, S.129, T.143, K.144, A.145, C.148, H.162, I.163, G.164, G.165 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:H.41, A:L.128 Hydrogen bonds: A:T.143, A:I.163 Water bridges: A:G.146, A:G.167 pi-Stacking: A:H.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, L. et al., Optimize the interactions at S4 with efficient inhibitors targeting 3C proteinase from enterovirus 71. J.Mol.Recognit. (2016)

Release Date

2016-06-01

Peptides

3C proteinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3C proteinase

Related Entries With Identical Sequence