SMTL ID : 5c5t.2 (1 other biounit)

The crystal structure of viral collagen prolyl hydroxylase vCPH from Paramecium Bursaria Chlorella virus-1 - 2OG complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)

AKG.1: 13 residues within 4Å: Chain A: Y.129, Y.135, H.138, D.140, M.158, T.172, H.207, G.209, K.217, I.219, N.221, W.223 Ligands: ZN.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.219 Hydrogen bonds: A:Y.129, A:Y.129, A:N.221 Water bridges: A:R.83, A:Y.135, A:K.217 Salt bridges: A:H.138, A:K.217

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.138, D.140, H.207 Ligands: AKG.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.138, A:D.140, A:H.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Longbotham, J.E. et al., Structure and Mechanism of a Viral Collagen Prolyl Hydroxylase. Biochemistry (2015)

Release Date

2015-09-30

Peptides

Prolyl 4-hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Prolyl 4-hydroxylase

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