SMTL ID : 5c5y.2 (1 other biounit)

Crystal structure of deoxyribose-phosphate aldolase from Colwellia psychrerythraea (hexagonal form)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x UNL: UNKNOWN LIGAND

UNL.1: 8 residues within 4Å: Chain A: T.18, D.102, K.166, S.168, T.169, G.170, G.233, A.234 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:K.166 UNL.2: 9 residues within 4Å: Chain B: T.18, L.20, D.102, K.166, S.168, T.169, G.170, K.198, G.233 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:T.18, B:K.166

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain B: K.126, G.161, A.162, D.163, N.192 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.126, B:D.163, B:N.192 Water bridges: B:K.126, B:G.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dick, M. et al., Trading off stability against activity in extremophilic aldolases. Sci Rep (2016)

Release Date

2016-02-03

Peptides

Deoxyribose-phosphate aldolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Deoxyribose-phosphate aldolase

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