- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x E42: (R)-2-amino-3-(3'-hydroxybiphenyl-3-yl)propanoic acid(Non-covalent)
- 5 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: M.19, H.23, E.24, R.31
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.24
- Water bridges: A:Y.32
- Salt bridges: A:H.23, A:R.31
SO4.3: 3 residues within 4Å:- Chain A: R.148, W.159, R.163
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.148
- Salt bridges: A:R.163
SO4.11: 5 residues within 4Å:- Chain B: S.108, S.194, E.198, N.214
- Ligands: EDO.16
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:S.194, B:N.214
- Water bridges: B:S.108, B:E.198, B:N.214, B:K.251
- Salt bridges: B:K.251
SO4.12: 4 residues within 4Å:- Chain B: M.19, H.23, E.24, R.31
4 PLIP interactions:4 interactions with chain B- Water bridges: B:R.31, B:R.31
- Salt bridges: B:H.23, B:R.31
SO4.13: 3 residues within 4Å:- Chain B: R.148, W.159, R.163
5 PLIP interactions:5 interactions with chain B- Water bridges: B:R.148, B:R.163, B:R.163
- Salt bridges: B:R.148, B:R.163
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 7 residues within 4Å:- Chain A: E.13, Y.61, P.89, E.193, M.196, Y.220
- Ligands: E42.1
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.220
- Water bridges: A:T.174, A:T.195
EDO.5: 8 residues within 4Å:- Chain A: S.217, K.218
- Chain B: P.105, F.106, M.107, S.108, N.242
- Ligands: EDO.16
7 PLIP interactions:4 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:F.106, B:S.108, B:S.108, A:S.217
- Water bridges: B:N.242, A:S.108, A:K.218
EDO.6: 6 residues within 4Å:- Chain A: P.105, F.106, M.107, S.108, N.242
- Chain B: S.217
7 PLIP interactions:1 interactions with chain B, 6 interactions with chain A- Water bridges: B:S.217, A:S.108, A:S.108, A:S.108
- Hydrogen bonds: A:F.106, A:S.108, A:N.242
EDO.7: 2 residues within 4Å:- Chain A: S.140, G.141
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.141
- Water bridges: A:D.139, A:R.148, A:R.148
EDO.8: 7 residues within 4Å:- Chain A: S.108, L.109, S.194, T.195, E.198, N.214, K.251
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.194, A:N.214, A:N.214
- Water bridges: A:S.108, A:K.251
EDO.14: 8 residues within 4Å:- Chain B: E.13, Y.61, P.89, E.193, T.195, M.196, Y.220
- Ligands: E42.10
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:T.195, B:Y.220
- Water bridges: B:T.174
EDO.15: 2 residues within 4Å:- Chain B: S.140, G.141
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.141
- Water bridges: B:D.139, B:R.148
EDO.16: 5 residues within 4Å:- Chain B: M.107, S.108, D.248
- Ligands: EDO.5, SO4.11
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.108
EDO.17: 2 residues within 4Å:- Chain B: M.18, M.19
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:M.19
EDO.18: 2 residues within 4Å:- Chain B: N.252, D.257
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:N.252
- Water bridges: B:D.257, B:D.257, B:D.257, B:D.257
- 1 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Szymanska, E. et al., Studies on Aryl-Substituted Phenylalanines: Synthesis, Activity, and Different Binding Modes at AMPA Receptors. J.Med.Chem. (2016)
- Release Date
- 2015-12-30
- Peptides
- Glutamate receptor 2,Glutamate receptor 2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x E42: (R)-2-amino-3-(3'-hydroxybiphenyl-3-yl)propanoic acid(Non-covalent)
- 5 x SO4: SULFATE ION(Non-functional Binders)
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Szymanska, E. et al., Studies on Aryl-Substituted Phenylalanines: Synthesis, Activity, and Different Binding Modes at AMPA Receptors. J.Med.Chem. (2016)
- Release Date
- 2015-12-30
- Peptides
- Glutamate receptor 2,Glutamate receptor 2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D