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SMTL ID : 5cd5.1

Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/E HIV-1 gp120 core

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.40 Å
Oligo State
hetero-1-1-1-mer
Ligands
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Kong, L. et al., Key gp120 Glycans Pose Roadblocks to the Rapid Development of VRC01-Class Antibodies in an HIV-1-Infected Chinese Donor. Immunity (2016)
Release Date
2016-04-06
Peptides
93TH057 HIV-1 gp120 core: A
DRVIA7 Fab Heavy Chain: B
DRVIA7 Fab Light Chain: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
C
C
D

93TH057 HIV-1 gp120 core

DRVIA7 Fab Heavy Chain

DRVIA7 Fab Light Chain

Related Entries With Identical Sequence

3ngb.1 | 3ngb.2 | 3ngb.3 | 3ngb.4 | 3se8.1 | 3se9.1 | 3tgt.1 | 4jb9.1 | 4lsp.1 | 4lsu.1 | 4olu.1 | 4olv.1 | 4olw.1 | 4olx.1 | 4oly.1 | 4olz.1 | 4om0.1 | 4om1.1 | 4s1q.1 | 4s1r.1 | 4s1s.1 | 4xnz.1 | 4xnz.2 | 4xnz.3 | 4xvt.1 | 4ydj.1 | 4ydj.2 | 4ydk.1 | 4ydl.1 | 4ydl.2  more...