- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x NAJ: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM)(Non-covalent)
NAJ.3: 29 residues within 4Å:- Chain A: C.46, R.47, S.48, H.51, C.174, T.178, G.199, L.200, G.201, G.202, V.203, D.223, I.224, N.225, K.228, V.268, I.269, G.270, R.271, V.292, G.293, V.294, A.317, I.318, F.319, L.362, R.369
- Ligands: ZN.1, PFB.4
26 PLIP interactions:26 interactions with chain A- Hydrophobic interactions: A:T.178, A:V.203
- Hydrogen bonds: A:R.47, A:H.51, A:T.178, A:L.200, A:G.201, A:G.202, A:V.203, A:I.224, A:I.269, A:R.271, A:V.292, A:V.294, A:F.319
- Water bridges: A:R.47, A:R.47, A:G.204, A:R.271, A:R.271, A:G.320, A:S.367, A:R.369, A:R.369
- Salt bridges: A:R.47, A:R.369
NAJ.9: 31 residues within 4Å:- Chain A: L.309
- Chain B: C.46, R.47, S.48, H.51, C.174, T.178, G.199, L.200, G.201, G.202, V.203, V.222, D.223, I.224, N.225, K.228, V.268, I.269, G.270, R.271, V.292, G.293, V.294, A.317, I.318, F.319, L.362, R.369
- Ligands: ZN.7, PFB.10
26 PLIP interactions:26 interactions with chain B- Hydrophobic interactions: B:T.178, B:V.203
- Hydrogen bonds: B:R.47, B:H.51, B:L.200, B:G.201, B:G.202, B:V.203, B:I.224, B:I.269, B:R.271, B:V.292, B:V.294, B:F.319
- Water bridges: B:R.47, B:R.47, B:G.204, B:K.228, B:K.228, B:R.271, B:G.320, B:S.367, B:R.369, B:R.369
- Salt bridges: B:R.47, B:R.369
- 2 x PFB: 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL(Non-covalent)
PFB.4: 14 residues within 4Å:- Chain A: C.46, S.48, L.57, H.67, F.93, L.116, F.140, L.141, C.174, V.294, I.318
- Chain B: L.309
- Ligands: ZN.1, NAJ.3
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:S.48
PFB.10: 14 residues within 4Å:- Chain A: L.309
- Chain B: C.46, S.48, L.57, H.67, F.93, L.116, F.140, L.141, C.174, V.294, I.318
- Ligands: ZN.7, NAJ.9
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:F.93
- Hydrogen bonds: B:S.48
- 2 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
MRD.5: 3 residues within 4Å:- Chain A: K.338, K.339, F.340
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.339
MRD.6: 3 residues within 4Å:- Chain A: W.15, R.133, K.135
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:W.15, A:W.15
- Hydrogen bonds: A:R.133, A:K.135
- Water bridges: A:R.133
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shanmuganatham, K.K. et al., Contribution of Buried Distal Amino Acid Residues in Horse Liver Alcohol Dehydrogenase to Structure and Catalysis. Protein Sci. (2017)
- Release Date
- 2015-07-15
- Peptides
- Alcohol dehydrogenase E chain: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x NAJ: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM)(Non-covalent)
- 2 x PFB: 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL(Non-covalent)
- 2 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shanmuganatham, K.K. et al., Contribution of Buried Distal Amino Acid Residues in Horse Liver Alcohol Dehydrogenase to Structure and Catalysis. Protein Sci. (2017)
- Release Date
- 2015-07-15
- Peptides
- Alcohol dehydrogenase E chain: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B