SMTL ID : 5cni.1

mGlu2 with Glutamate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

homo-dimer

Ligands

2 x GLU: GLUTAMIC ACID(Non-covalent)

GLU.1: 12 residues within 4Å: Chain A: R.59, R.63, S.145, Y.146, S.147, A.168, S.169, T.170, S.171, Y.218, D.297, K.379 7 PLIP interactions: 7 interactions with chain A, Hydrogen bonds: A:S.147, A:T.170, A:T.170, A:S.171 Salt bridges: A:R.59, A:R.63, A:K.379 GLU.6: 11 residues within 4Å: Chain B: R.59, R.63, S.145, Y.146, S.147, A.168, S.169, T.170, Y.218, D.297, K.379 8 PLIP interactions: 7 interactions with chain B, 1 Ligand-Ligand interactions Hydrogen bonds: B:S.147, B:T.170, B:T.170, B:D.297, E.6 Salt bridges: B:R.59, B:R.63, B:K.379

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: S.93, S.145, Y.146, V.149 Ligand excluded by PLIP CL.7: 6 residues within 4Å: Chain B: P.41, S.93, G.144, S.145, Y.146, V.149 Ligand excluded by PLIP

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 6 residues within 4Å: Chain A: I.74, N.75, D.77, L.80, L.81, P.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.74, A:D.77 NA.8: 6 residues within 4Å: Chain B: I.74, N.75, D.77, L.80, L.81, P.82 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:L.81

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 3 residues within 4Å: Chain A: F.203, F.204, N.205 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.203, A:N.205 NAG.5: 1 residues within 4Å: Chain A: N.288 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.288 Water bridges: A:N.288 NAG.9: 3 residues within 4Å: Chain B: F.203, F.204, N.205 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:F.203, B:N.205 NAG.10: 1 residues within 4Å: Chain B: N.288 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Monn, J.A. et al., Synthesis and Pharmacological Characterization of C4-(Thiotriazolyl)-substituted-2-aminobicyclo[3.1.0]hexane-2,6-dicarboxylates. Identification of (1R,2S,4R,5R,6R)-2-Amino-4-(1H-1,2,4-triazol-3-ylsulfanyl)bicyclo[3.1.0]hexane-2,6-dicarboxylic Acid (LY2812223), a Highly Potent, Functionally Selective mGlu2 Receptor Agonist. J.Med.Chem. (2015)

Release Date

2015-09-09

Peptides

Metabotropic glutamate receptor 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Metabotropic glutamate receptor 2

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