SMTL ID : 5cqf.1

Crystal structure of L-lysine 6-monooxygenase from Pseudomonas syringae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-tetramer

Ligands

44 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 4 residues within 4Å: Chain A: Q.248, F.249, Y.282, G.284 Ligand excluded by PLIP IOD.2: 2 residues within 4Å: Chain A: R.290, L.308 Ligand excluded by PLIP IOD.3: 3 residues within 4Å: Chain A: R.380, Y.382, R.421 Ligand excluded by PLIP IOD.4: 3 residues within 4Å: Chain A: F.187, H.188, R.195 Ligand excluded by PLIP IOD.5: 1 residues within 4Å: Chain B: R.75 Ligand excluded by PLIP IOD.6: 2 residues within 4Å: Chain A: G.240 Chain C: H.258 Ligand excluded by PLIP IOD.7: 3 residues within 4Å: Chain A: G.213, A.216, G.349 Ligand excluded by PLIP IOD.8: 7 residues within 4Å: Chain A: Q.245, L.246, R.252 Chain C: Q.245, L.246, R.252 Ligands: IOD.30 Ligand excluded by PLIP IOD.9: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.10: 2 residues within 4Å: Chain A: V.315, I.316 Ligand excluded by PLIP IOD.11: 2 residues within 4Å: Chain A: V.73 Chain B: H.72 Ligand excluded by PLIP IOD.12: 4 residues within 4Å: Chain B: Q.248, F.249, Y.282, G.284 Ligand excluded by PLIP IOD.13: 2 residues within 4Å: Chain B: R.290, L.308 Ligand excluded by PLIP IOD.14: 3 residues within 4Å: Chain B: R.380, Y.382, R.421 Ligand excluded by PLIP IOD.15: 3 residues within 4Å: Chain B: F.187, H.188, R.195 Ligand excluded by PLIP IOD.16: 1 residues within 4Å: Chain A: R.75 Ligand excluded by PLIP IOD.17: 2 residues within 4Å: Chain B: G.240 Chain D: H.258 Ligand excluded by PLIP IOD.18: 3 residues within 4Å: Chain B: G.213, A.216, G.349 Ligand excluded by PLIP IOD.19: 7 residues within 4Å: Chain B: Q.245, L.246, R.252 Chain D: Q.245, L.246, R.252 Ligands: IOD.41 Ligand excluded by PLIP IOD.20: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.21: 2 residues within 4Å: Chain B: V.315, I.316 Ligand excluded by PLIP IOD.22: 2 residues within 4Å: Chain A: H.72 Chain B: V.73 Ligand excluded by PLIP IOD.23: 4 residues within 4Å: Chain C: Q.248, F.249, Y.282, G.284 Ligand excluded by PLIP IOD.24: 2 residues within 4Å: Chain C: R.290, L.308 Ligand excluded by PLIP IOD.25: 3 residues within 4Å: Chain C: R.380, Y.382, R.421 Ligand excluded by PLIP IOD.26: 3 residues within 4Å: Chain C: F.187, H.188, R.195 Ligand excluded by PLIP IOD.27: 1 residues within 4Å: Chain D: R.75 Ligand excluded by PLIP IOD.28: 2 residues within 4Å: Chain A: H.258 Chain C: G.240 Ligand excluded by PLIP IOD.29: 3 residues within 4Å: Chain C: G.213, A.216, G.349 Ligand excluded by PLIP IOD.30: 7 residues within 4Å: Chain A: Q.245, L.246, R.252 Chain C: Q.245, L.246, R.252 Ligands: IOD.8 Ligand excluded by PLIP IOD.31: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.32: 2 residues within 4Å: Chain C: V.315, I.316 Ligand excluded by PLIP IOD.33: 2 residues within 4Å: Chain C: V.73 Chain D: H.72 Ligand excluded by PLIP IOD.34: 4 residues within 4Å: Chain D: Q.248, F.249, Y.282, G.284 Ligand excluded by PLIP IOD.35: 2 residues within 4Å: Chain D: R.290, L.308 Ligand excluded by PLIP IOD.36: 3 residues within 4Å: Chain D: R.380, Y.382, R.421 Ligand excluded by PLIP IOD.37: 3 residues within 4Å: Chain D: F.187, H.188, R.195 Ligand excluded by PLIP IOD.38: 1 residues within 4Å: Chain C: R.75 Ligand excluded by PLIP IOD.39: 2 residues within 4Å: Chain B: H.258 Chain D: G.240 Ligand excluded by PLIP IOD.40: 3 residues within 4Å: Chain D: G.213, A.216, G.349 Ligand excluded by PLIP IOD.41: 7 residues within 4Å: Chain B: Q.245, L.246, R.252 Chain D: Q.245, L.246, R.252 Ligands: IOD.19 Ligand excluded by PLIP IOD.42: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.43: 2 residues within 4Å: Chain D: V.315, I.316 Ligand excluded by PLIP IOD.44: 2 residues within 4Å: Chain C: H.72 Chain D: V.73 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michalska, K. et al., Crystal structure of L-lysine 6-monooxygenase from Pseudomonas syringae. To Be Published

Release Date

2015-09-30

Peptides

L-lysine 6-monooxygenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

L-lysine 6-monooxygenase