SMTL ID : 5da0.1

Structure of the the SLC26 transporter SLC26Dg in complex with a nanobody

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-oligomer

Ligands

2 x DMU: DECYL-BETA-D-MALTOPYRANOSIDE(Non-covalent)

DMU.1: 12 residues within 4Å: Chain A: V.127, M.128, F.131, L.236, V.237, L.240, E.241, L.244, V.335, S.338, T.339, V.376 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.127, A:F.131, A:F.131, A:L.236, A:L.240, A:L.240, A:V.376 Hydrogen bonds: A:S.338 DMU.2: 6 residues within 4Å: Chain A: R.15, W.17, R.70, D.254, T.255, T.256 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:W.17, A:R.70, A:R.70, A:T.255, A:T.255, A:T.256 Salt bridges: A:R.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Geertsma, E.R. et al., Structure of a prokaryotic fumarate transporter reveals the architecture of the SLC26 family. Nat.Struct.Mol.Biol. (2015)

Release Date

2015-09-09

Peptides

Sulphate transporter: A
Nanobody: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Sulphate transporter

Nanobody