- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.77 Å
- Oligo State
- homo-tetramer
- Ligands
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 4 x COA: COENZYME A(Non-covalent)
COA.3: 32 residues within 4Å:- Chain A: M.68, I.116, T.117, C.119, T.120, N.143, P.144, H.145, P.146, A.147, T.180, L.181, S.184, G.200, G.201, P.202, G.203, V.204, G.219, A.220, G.221, N.249, L.250, P.251, A.252, K.256, L.299, R.301, V.304, E.340, M.342
- Ligands: ACT.6
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:T.120, A:V.304
- Hydrogen bonds: A:T.117, A:T.117, A:N.143, A:H.145, A:E.340
- Water bridges: A:V.204
- Salt bridges: A:H.145, A:H.145, A:R.301, A:R.301
COA.11: 32 residues within 4Å:- Chain B: M.68, I.116, T.117, C.119, T.120, N.143, P.144, H.145, P.146, A.147, T.180, L.181, S.184, G.200, G.201, P.202, G.203, V.204, G.219, A.220, G.221, N.249, L.250, P.251, A.252, K.256, L.299, R.301, V.304, E.340, M.342
- Ligands: ACT.14
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:T.120, B:V.304
- Hydrogen bonds: B:T.117, B:T.117, B:N.143, B:H.145, B:E.340
- Water bridges: B:V.204
- Salt bridges: B:H.145, B:H.145, B:R.301, B:R.301
COA.19: 32 residues within 4Å:- Chain C: M.68, I.116, T.117, C.119, T.120, N.143, P.144, H.145, P.146, A.147, T.180, L.181, S.184, G.200, G.201, P.202, G.203, V.204, G.219, A.220, G.221, N.249, L.250, P.251, A.252, K.256, L.299, R.301, V.304, E.340, M.342
- Ligands: ACT.22
12 PLIP interactions:12 interactions with chain C- Hydrophobic interactions: C:T.120, C:V.304
- Hydrogen bonds: C:T.117, C:T.117, C:N.143, C:H.145, C:E.340
- Water bridges: C:V.204
- Salt bridges: C:H.145, C:H.145, C:R.301, C:R.301
COA.27: 32 residues within 4Å:- Chain D: M.68, I.116, T.117, C.119, T.120, N.143, P.144, H.145, P.146, A.147, T.180, L.181, S.184, G.200, G.201, P.202, G.203, V.204, G.219, A.220, G.221, N.249, L.250, P.251, A.252, K.256, L.299, R.301, V.304, E.340, M.342
- Ligands: ACT.30
12 PLIP interactions:12 interactions with chain D- Hydrophobic interactions: D:T.120, D:V.304
- Hydrogen bonds: D:T.117, D:T.117, D:N.143, D:H.145, D:E.340
- Water bridges: D:V.204
- Salt bridges: D:H.145, D:H.145, D:R.301, D:R.301
- 16 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 4 residues within 4Å:- Chain A: S.189, H.190, Q.191, D.192
Ligand excluded by PLIPACT.5: 9 residues within 4Å:- Chain A: N.121, P.251, A.252, I.253, I.404, T.413, F.414, I.416
- Ligands: ACT.6
Ligand excluded by PLIPACT.6: 10 residues within 4Å:- Chain A: P.118, T.120, N.121, T.199, P.251, A.252, F.414, I.416
- Ligands: COA.3, ACT.5
Ligand excluded by PLIPACT.7: 5 residues within 4Å:- Chain A: R.100
- Chain B: K.84, G.405, F.406, G.407
Ligand excluded by PLIPACT.12: 4 residues within 4Å:- Chain B: S.189, H.190, Q.191, D.192
Ligand excluded by PLIPACT.13: 9 residues within 4Å:- Chain B: N.121, P.251, A.252, I.253, I.404, T.413, F.414, I.416
- Ligands: ACT.14
Ligand excluded by PLIPACT.14: 10 residues within 4Å:- Chain B: P.118, T.120, N.121, T.199, P.251, A.252, F.414, I.416
- Ligands: COA.11, ACT.13
Ligand excluded by PLIPACT.15: 5 residues within 4Å:- Chain A: K.84, G.405, F.406, G.407
- Chain B: R.100
Ligand excluded by PLIPACT.20: 4 residues within 4Å:- Chain C: S.189, H.190, Q.191, D.192
Ligand excluded by PLIPACT.21: 9 residues within 4Å:- Chain C: N.121, P.251, A.252, I.253, I.404, T.413, F.414, I.416
- Ligands: ACT.22
Ligand excluded by PLIPACT.22: 10 residues within 4Å:- Chain C: P.118, T.120, N.121, T.199, P.251, A.252, F.414, I.416
- Ligands: COA.19, ACT.21
Ligand excluded by PLIPACT.23: 5 residues within 4Å:- Chain C: R.100
- Chain D: K.84, G.405, F.406, G.407
Ligand excluded by PLIPACT.28: 4 residues within 4Å:- Chain D: S.189, H.190, Q.191, D.192
Ligand excluded by PLIPACT.29: 9 residues within 4Å:- Chain D: N.121, P.251, A.252, I.253, I.404, T.413, F.414, I.416
- Ligands: ACT.30
Ligand excluded by PLIPACT.30: 10 residues within 4Å:- Chain D: P.118, T.120, N.121, T.199, P.251, A.252, F.414, I.416
- Ligands: COA.27, ACT.29
Ligand excluded by PLIPACT.31: 5 residues within 4Å:- Chain C: K.84, G.405, F.406, G.407
- Chain D: R.100
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tuck, L.R. et al., Insight into Coenzyme A cofactor binding and the mechanism of acyl-transfer in an acylating aldehyde dehydrogenase from Clostridium phytofermentans. Sci Rep (2016)
- Release Date
- 2016-03-16
- Peptides
- Aldehyde Dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.77 Å
- Oligo State
- homo-tetramer
- Ligands
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 4 x COA: COENZYME A(Non-covalent)
- 16 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tuck, L.R. et al., Insight into Coenzyme A cofactor binding and the mechanism of acyl-transfer in an acylating aldehyde dehydrogenase from Clostridium phytofermentans. Sci Rep (2016)
- Release Date
- 2016-03-16
- Peptides
- Aldehyde Dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A