SMTL ID : 5drx.2 (1 other biounit)

Crystal structure of the BCR Fab fragment from subset #4 case CLL240

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: E.161, P.162, V.163, P.180, A.181, L.191 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.158, A:V.163, A:V.163, A:A.181 Water bridges: A:A.181 GOL.2: 2 residues within 4Å: Chain B: D.59, R.60 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.59, B:R.60, B:R.60 Water bridges: B:Y.55 GOL.3: 6 residues within 4Å: Chain A: V.176, H.177 Chain B: T.171, E.172, Q.173, D.174 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:E.172, B:D.174, B:D.174, A:V.176 Water bridges: B:S.175, A:T.178, A:T.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Minici, C. et al., Distinct homotypic B-cell receptor interactions shape the outcome of chronic lymphocytic leukaemia. Nat Commun (2017)

Release Date

2016-09-28

Peptides

CLL240 heavy chain (VH and CH1 domains): A
CLL240 BCR light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CLL240 heavy chain (VH and CH1 domains)

CLL240 BCR light chain

Related Entries With Identical Sequence