SMTL ID : 5dzq.1

C3larvin toxin, an ADP-ribosyltransferase from Paenibacillus larvae, Orthorhombic Form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: G.201, S.202 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain B: N.199, G.201, S.202 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:S.202

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: Q.92, T.157, L.158, K.159, D.192, E.208, A.209, T.210 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.92, A:T.157, A:K.159, A:D.192, A:A.209, A:T.210 GOL.4: 6 residues within 4Å: Chain B: Q.92, T.157, D.192, E.208, A.209, T.210 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.92, B:T.157, B:D.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lugo, M.R. et al., Structural variability of C3larvin toxin. Intrinsic dynamics of the alpha / beta fold of the C3-like group of mono-ADP-ribosyltransferase toxins. J. Biomol. Struct. Dyn. (2016)

Release Date

2015-10-14

Peptides

Toxin-like protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
O

Toxin-like protein

Related Entries With Identical Sequence