SMTL ID : 5dzt.1

Crystal structure of class II lanthipeptide synthetase CylM in complex with AMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: Y.695, C.875, C.911, H.912 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.875, A:C.911, A:H.912

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.2: 12 residues within 4Å: Chain A: Q.250, V.260, V.272, K.274, K.276, E.312, E.313, Y.314, I.315, I.354, I.363, D.364 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Q.250, A:Q.250, A:K.274, A:E.312, A:E.312, A:I.315, A:D.364 Salt bridges: A:K.274, A:K.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, S.H. et al., The enterococcal cytolysin synthetase has an unanticipated lipid kinase fold. Elife (2015)

Release Date

2015-10-14

Peptides

CylM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CylM