SMTL ID : 5e0o.1

Brugia malayi Trehalose-6 Phosphate Phosphatase in complex with PEG at the active site.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 7 residues within 4Å: Chain A: D.247, D.249, K.432, D.458, T.459, D.462 Ligands: PEG.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.247, A:D.247, A:D.458, H2O.1 MG.4: 7 residues within 4Å: Chain B: D.247, D.249, K.432, D.458, T.459, D.462 Ligands: PEG.6 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.247, B:D.247, B:D.458, H2O.2

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: T.459, L.460, S.461 Chain B: K.485, S.487 Ligands: PEG.3 8 PLIP interactions: 4 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:S.487, B:S.487, A:T.459, A:L.460, A:S.461, A:S.461 Water bridges: B:S.487 Salt bridges: B:K.485 SO4.5: 6 residues within 4Å: Chain A: K.485, S.487 Chain B: T.459, L.460, S.461 Ligands: PEG.6 7 PLIP interactions: 3 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:L.460, B:S.461, B:S.461, A:S.487, A:S.487 Water bridges: A:S.487 Salt bridges: A:K.485

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 12 residues within 4Å: Chain A: D.247, W.248, D.249, T.287, A.288, W.314, K.432, T.459, S.461, D.462 Ligands: MG.1, SO4.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:W.248, A:D.249, A:A.288, A:K.432, A:T.459, A:S.461, A:S.461 PEG.6: 12 residues within 4Å: Chain B: D.247, W.248, D.249, T.287, A.288, W.314, K.432, T.459, S.461, D.462 Ligands: MG.4, SO4.5 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:W.248, B:D.249, B:D.249, B:A.288, B:K.432, B:S.461, B:S.461

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agarwal, A. et al., Brugia malayi Trehalose Phosphate Phosphatase in complex with PEG at the active site. To Be Published (2015)

Release Date

2015-10-28

Peptides

Trehalose-phosphatase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Trehalose-phosphatase