SMTL ID : 5e3b.1

Structure of macrodomain protein from Streptomyces coelicolor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: Y.26, V.27, R.144, V.174, D.176 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.27, A:R.144, A:R.144, A:D.176 NA.2: 1 residues within 4Å: Chain A: D.176 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.176

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: N.47, G.51, W.52, G.53, K.54, V.57, M.108 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.51, A:G.53, A:K.54 Water bridges: A:N.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lalic, J. et al., Disruption of Macrodomain Protein SCO6735 Increases Antibiotic Production in Streptomyces coelicolor. J.Biol.Chem. (2016)

Release Date

2016-09-28

Peptides

Macrodomain protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Macrodomain protein