SMTL ID : 5e5j.1

Joint X-ray/neutron structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with darunavir at pH 6.0

Coordinates

PDB Format

Method

NEUTRON DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x 017: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE(Covalent)

017.1: 30 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, D.29, D.30, I.32, V.47, G.48, G.49, I.50, P.81, I.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, D.30, I.32, V.47, G.48, G.49, I.50, L.76, P.81, I.82, I.84 25 PLIP interactions: 13 interactions with chain B, 12 interactions with chain A Hydrophobic interactions: B:L.23, B:A.28, B:I.32, B:V.47, B:P.81, B:I.82, B:I.84, A:L.23, A:V.47, A:I.82, A:I.84 Hydrogen bonds: B:D.30, B:D.30, B:D.30, B:G.49, B:I.50, A:D.25, A:G.27, A:A.28, A:D.29, A:D.30 Salt bridges: B:D.25, A:D.25 Water bridges: A:I.50, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gerlits, O. et al., Long-Range Electrostatics-Induced Two-Proton Transfer Captured by Neutron Crystallography in an Enzyme Catalytic Site. Angew.Chem.Int.Ed.Engl. (2016)

Release Date

2016-05-04

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease

Related Entries With Identical Sequence