SMTL ID : 5e7x.1

Ligand binding domain 1 of Penicillium marneffei MP1 protein in complex with palmitic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 16 residues within 4Å: Chain A: I.17, I.46, T.50, A.68, L.71, V.75, I.82, Q.112, A.116, S.120, V.123, S.124, L.131, S.135, S.139, L.146 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.17, A:L.71, A:V.75, A:V.75, A:A.116, A:V.123, A:L.131 Hydrogen bonds: A:Q.112 Water bridges: A:T.50

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 3 residues within 4Å: Chain A: K.48, E.51, N.52 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.51 Salt bridges: A:K.48

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: K.48, N.52 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lam, W.H. et al., Talaromyces marneffeiMp1 protein, a novel virulence factor, carries two arachidonic acid-binding domains to suppress inflammatory responses in hosts. Infect. Immun. (2019)

Release Date

2016-10-19

Peptides

Cell wall antigen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell wall antigen