SMTL ID : 5e80.2 (1 other biounit)

The crystal structure of PDEd in complex with inhibitor-2a

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x 5KP: N-(3-chloro-2-methylphenyl)-4-(3,4-dimethyl-7-oxo-2-phenyl-2,7-dihydro-6H-pyrazolo[3,4-d]pyridazin-6-yl)butanamide(Non-covalent)

5KP.1: 19 residues within 4Å: Chain A: M.19, L.21, L.37, A.46, V.48, I.52, L.53, R.60, L.62, Q.77, I.108, A.110, S.114, L.122, I.128, T.130, V.144, L.146, Y.148 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.21, A:L.37, A:L.37, A:A.46, A:V.48, A:I.52, A:L.53, A:L.62, A:A.110, A:L.122, A:I.128, A:V.144, A:L.146 Hydrogen bonds: A:R.60, A:Q.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Papke, B. et al., Identification of pyrazolopyridazinones as PDE delta inhibitors. Nat Commun (2016)

Release Date

2016-05-04

Peptides

Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta

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