SMTL ID : 5egb.1

Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence II

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain C: C.8, C.11, H.24, H.28 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.8, C:C.11, C:H.24, C:H.28 ZN.2: 4 residues within 4Å: Chain C: C.36, C.39, H.52, H.56 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.36, C:C.39, C:H.52, C:H.56 ZN.3: 4 residues within 4Å: Chain C: C.64, C.67, H.80, H.84 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.64, C:C.67, C:H.80, C:H.84 ZN.4: 4 residues within 4Å: Chain C: C.92, C.95, H.108, H.112 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.92, C:C.95, C:H.108, C:H.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patel, A. et al., Structural basis for human PRDM9 action at recombination hot spots. Genes Dev. (2016)

Release Date

2016-02-17

Peptides

Histone-lysine N-methyltransferase PRDM9: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

Histone-lysine N-methyltransferase PRDM9

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