SMTL ID : 5ej8.2 (3 other biounits)

EcMenD-ThDP-Mn2+ complex structure soaked with 2-ketoglutarate for 2 min

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.34 Å
Oligo State
homo-dimer
Ligands
7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
2 x TD6: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid(Non-covalent)
2 x MN: MANGANESE (II) ION(Non-covalent)
4 x MG: MAGNESIUM ION(Non-covalent)
4 x GOL: GLYCEROL(Non-functional Binders)
1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
9 x FMT: FORMIC ACID(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Song, H.G. et al., A Thiamine-Dependent Enzyme Utilizes an Active Tetrahedral Intermediate in Vitamin K Biosynthesis. J.Am.Chem.Soc. (2016)
Release Date
2016-06-01
Peptides
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D

2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase

Toggle Identical (AB)

Related Entries With Identical Sequence

5ej4.1 | 5ej4.2 | 5ej4.3 | 5ej4.4 | 5ej5.1 | 5ej5.2 | 5ej5.3 | 5ej5.4 | 5ej6.1 | 5ej6.2 | 5ej6.3 | 5ej6.4 | 5ej7.1 | 5ej7.2 | 5ej7.3 | 5ej7.4 | 5ej8.1 | 5ej8.3 | 5ej8.4 | 5ej9.1 | 5ej9.2 | 5ej9.3 | 5ej9.4 | 5eja.1 | 5eja.2 | 5eja.3 | 5eja.4