SMTL ID : 5eol.1

Crystal structure of human Pim-1 kinase in complex with a macrocyclic quinoxaline-pyrrolodihydropiperidinone inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 5QO: macrocyclic quinoxaline-pyrrolodihydropiperidinone(Non-covalent)

5QO.1: 14 residues within 4Å: Chain A: L.25, G.26, F.30, V.33, A.46, K.48, I.85, E.102, R.103, V.107, D.109, L.155, I.166, D.167 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.30, A:F.30, A:V.33, A:A.46, A:I.85, A:R.103, A:V.107, A:L.155, A:I.166 Hydrogen bonds: A:D.167, A:D.167 Water bridges: A:F.168

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: D.89, W.90 1 PLIP interactions: 1 interactions with chain A Water bridges: A:W.90 GOL.3: 4 residues within 4Å: Chain A: P.104, E.105, D.157, R.160 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.105, A:E.105, A:R.160, A:R.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cee, V.J. et al., Discovery and Optimization of Macrocyclic Quinoxaline-pyrrolo-dihydropiperidinones as Potent Pim-1/2 Kinase Inhibitors. Acs Med.Chem.Lett. (2016)

Release Date

2016-05-04

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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