- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x VC2: (3S,5S,7aR)-2,2-dimethyl-5-(sulfanylmethyl)tetrahydro[1,3]thiazolo[4,3-b][1,3]thiazole-3-carboxylic acid(Non-covalent)
- 8 x ZN: ZINC ION(Non-covalent)
ZN.2: 5 residues within 4Å:- Chain A: H.86, H.88, H.162
- Ligands: VC2.1, ZN.3
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:H.86, A:H.88, A:H.162
ZN.3: 5 residues within 4Å:- Chain A: D.90, H.91, H.227
- Ligands: VC2.1, ZN.2
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.90, A:H.91, A:H.227, H2O.2
ZN.7: 5 residues within 4Å:- Chain B: H.86, H.88, H.162
- Ligands: VC2.6, ZN.8
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:H.86, B:H.88, B:H.162
ZN.8: 5 residues within 4Å:- Chain B: D.90, H.91, H.227
- Ligands: VC2.6, ZN.7
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.90, B:H.91, B:H.227, H2O.12
ZN.12: 5 residues within 4Å:- Chain C: H.86, H.88, H.162
- Ligands: VC2.11, ZN.13
3 PLIP interactions:3 interactions with chain C- Metal complexes: C:H.86, C:H.88, C:H.162
ZN.13: 5 residues within 4Å:- Chain C: D.90, H.91, H.227
- Ligands: VC2.11, ZN.12
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:D.90, C:H.91, C:H.227, H2O.23
ZN.17: 5 residues within 4Å:- Chain D: H.86, H.88, H.162
- Ligands: VC2.16, ZN.18
3 PLIP interactions:3 interactions with chain D- Metal complexes: D:H.86, D:H.88, D:H.162
ZN.18: 5 residues within 4Å:- Chain D: D.90, H.91, H.227
- Ligands: VC2.16, ZN.17
4 PLIP interactions:3 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:D.90, D:H.91, D:H.227, H2O.33
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: R.139, V.146, I.147, T.148
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:T.148, A:T.148, A:T.148
- Water bridges: A:R.139, A:R.139, A:R.139, A:R.139
- Salt bridges: A:R.139
SO4.5: 6 residues within 4Å:- Chain A: R.175, A.239, R.240, A.241, G.242, A.243
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:R.175, A:A.239, A:G.242, A:A.243
- Water bridges: A:A.241, A:A.241
SO4.9: 4 residues within 4Å:- Chain B: R.139, V.146, I.147, T.148
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:T.148, B:T.148, B:T.148
- Water bridges: B:R.139, B:R.139, B:R.139, B:R.139
- Salt bridges: B:R.139
SO4.10: 6 residues within 4Å:- Chain B: R.175, A.239, R.240, A.241, G.242, A.243
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:R.175, B:A.239, B:G.242, B:A.243
- Water bridges: B:A.241, B:A.241
SO4.14: 4 residues within 4Å:- Chain C: R.139, V.146, I.147, T.148
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:T.148, C:T.148
- Water bridges: C:R.139, C:R.139, C:R.139, C:R.139
- Salt bridges: C:R.139
SO4.15: 6 residues within 4Å:- Chain C: R.175, A.239, R.240, A.241, G.242, A.243
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:R.175, C:A.239, C:G.242, C:A.243
- Water bridges: C:A.241, C:A.241
SO4.19: 4 residues within 4Å:- Chain D: R.139, V.146, I.147, T.148
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:T.148, D:T.148
- Water bridges: D:R.139, D:R.139, D:R.139, D:R.139
- Salt bridges: D:R.139
SO4.20: 6 residues within 4Å:- Chain D: R.175, A.239, R.240, A.241, G.242, A.243
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:R.175, D:A.239, D:G.242, D:A.243
- Water bridges: D:A.241, D:A.241
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hinchliffe, P. et al., Cross-class metallo-beta-lactamase inhibition by bisthiazolidines reveals multiple binding modes. Proc.Natl.Acad.Sci.USA (2016)
- Release Date
- 2016-06-01
- Peptides
- Metallo-beta-lactamase L1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x VC2: (3S,5S,7aR)-2,2-dimethyl-5-(sulfanylmethyl)tetrahydro[1,3]thiazolo[4,3-b][1,3]thiazole-3-carboxylic acid(Non-covalent)
- 8 x ZN: ZINC ION(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hinchliffe, P. et al., Cross-class metallo-beta-lactamase inhibition by bisthiazolidines reveals multiple binding modes. Proc.Natl.Acad.Sci.USA (2016)
- Release Date
- 2016-06-01
- Peptides
- Metallo-beta-lactamase L1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A