SMTL ID : 5eyw.1

Crystal structure of Litopenaeus vannamei triosephosphate isomerase complexed with 2-Phosphoglycolic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x PGA: 2-PHOSPHOGLYCOLIC ACID(Non-covalent)

PGA.1: 12 residues within 4Å: Chain A: N.12, K.14, H.96, E.166, A.170, I.171, G.172, G.211, S.212, L.231, G.233, G.234 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:N.12, A:G.172, A:S.212, A:V.213, A:G.233, A:G.234 Water bridges: A:G.174, A:G.211, A:A.235, A:A.235, A:A.235 Salt bridges: A:K.14, A:K.14, A:H.96 PGA.2: 13 residues within 4Å: Chain B: N.12, K.14, H.96, E.166, A.170, I.171, G.172, G.211, S.212, L.231, V.232, G.233, G.234 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:N.12, B:E.166, B:G.172, B:S.212, B:G.233, B:G.234 Water bridges: B:V.213, B:V.213, B:A.235 Salt bridges: B:K.14, B:K.14, B:H.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lopez-Zavala, A.A. et al., Structural insights from a novel invertebrate triosephosphate isomerase from Litopenaeus vannamei. Biochim.Biophys.Acta (2016)

Release Date

2016-09-28

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Triosephosphate isomerase