SMTL ID : 5fg0.1 (1 other biounit)

Structure of the conserved yeast listerin (Ltn1) N-terminal domain, MONOCLINIC FORM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.41 Å

Oligo State

monomer

Ligands

1 x K: POTASSIUM ION(Non-covalent)

K.1: 5 residues within 4Å: Chain A: V.175, E.178, N.179, Y.198, S.235 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.178, A:Y.198, A:S.235, H2O.2, H2O.3

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 8 residues within 4Å: Chain A: I.89, R.97, H.101, L.128, G.129, E.132, R.200, S.204 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.101, A:R.200, A:S.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Doamekpor, S.K. et al., Structure and function of the yeast listerin (Ltn1) conserved N-terminal domain in binding to stalled 60S ribosomal subunits. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2016-07-06

Peptides

E3 ubiquitin-protein ligase listerin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase listerin

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