SMTL ID : 5fjx.2 (2 other biounits)

Yeast delta-COP-I mu-homology domain complexed with Gcs1 WxxF peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

monomer

Ligands

1 x ASP- LYS- TRP- ASP- ASP- PHE: ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN GCS1(Non-covalent)

ASP-LYS-TRP-ASP-ASP-PHE.1: 13 residues within 4Å: Chain A: K.72, T.73, H.74, P.75, N.76, L.90, K.95, F.97, P.98, S.103, L.104, G.105, R.108 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:H.74, A:N.76, A:L.90, A:F.97, A:P.98, A:L.104, A:R.108 Hydrogen bonds: A:H.74, A:N.76, A:S.103, A:R.108, A:R.108 Water bridges: A:G.105 Salt bridges: A:K.95 pi-Cation interactions: A:R.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Suckling, R.J. et al., Structural Basis for the Binding of Tryptophan-Based Motifs by Delta-Cop. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-11-11

Peptides

COATOMER SUBUNIT DELTA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

COATOMER SUBUNIT DELTA

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