SMTL ID : 5fkq.1 (1 other biounit)

Unraveling the first step of xyloglucan degradation by the soil saprophyte Cellvibrio japonicus through the functional and structural characterization of a potent GH74 endo-xyloglucanase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x BR: BROMIDE ION(Non-covalent)

BR.1: 6 residues within 4Å: Chain A: Y.297, I.319, A.320, W.321, W.322 Ligands: K.4 Ligand excluded by PLIP

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: D.15, E.359, V.360, P.423, M.424, V.425, K.426 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.15, A:V.425, A:K.426 EDO.3: 4 residues within 4Å: Chain A: R.154, T.156, A.163, K.164 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.154, A:R.154, A:K.164

1 x K: POTASSIUM ION(Non-covalent)

K.4: 4 residues within 4Å: Chain A: G.268, Y.297, I.319 Ligands: BR.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.268, A:Y.297, A:I.319, H2O.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Attia, M. et al., Functional and Structural Characterization of a Potent Gh74 Endo-Xyloglucanase from the Soil Saprophyte Cellvibrio Japonicus Unravels the First Step of Xyloglucan Degradation. FEBS J. (2016)

Release Date

2015-11-04

Peptides

ENDO-1,4-BETA-GLUCANASE/XYLOGLUCANASE, PUTATIVE, GLY74A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ENDO-1,4-BETA-GLUCANASE/XYLOGLUCANASE, PUTATIVE, GLY74A

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