SMTL ID : 5fky.1 (1 other biounit)

Structure of a hydrolase bound with an inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: Y.137, D.344, Y.345, R.347, Y.550, Q.551 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.344, A:R.347, A:Q.551

1 x 2J4: (3aR,5R,6S,7R,7aR)-2-amino-5-(hydroxymethyl)-5,6,7,7a-tetrahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diol

2J4.2: 17 residues within 4Å: Chain A: G.135, F.136, Y.137, K.166, D.242, D.243, C.278, Y.282, T.310, V.314, I.315, W.337, N.339, V.342, D.344, Y.345, N.372 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.135, A:Y.137, A:K.166, A:D.242, A:N.339, A:D.344, A:D.344, A:N.372 Water bridges: A:Y.282

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cekic, N. et al., Analysis of transition state mimicry by tight binding aminothiazoline inhibitors provides insight into catalysis by humanO-GlcNAcase. Chem Sci (2016)

Release Date

2016-01-27

Peptides

O-GLCNACASE BT_4395: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

O-GLCNACASE BT_4395

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