SMTL ID : 5fpy.1

Structure of hepatitis C virus (HCV) full-length NS3 complex with small-molecule ligand 5-bromo-1-methyl-1H-indole-2-carboxylic acid (AT21457) in an alternate binding site.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.52 Å

Oligo State

homo-dimer

Ligands

2 x R2N: 5-bromo-1-methyl-1H-indole-2-carboxylic acid(Non-covalent)

R2N.1: 7 residues within 4Å: Chain A: H.404, S.405, K.406, V.467, Q.469, T.483, N.591 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.467, A:T.483 Hydrogen bonds: A:K.406 R2N.2: 7 residues within 4Å: Chain B: H.404, S.405, K.406, V.467, Q.469, T.483, N.591 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:V.467, B:V.467, B:T.483 Hydrogen bonds: B:K.406 Water bridges: B:S.405, B:K.407, B:K.407

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ludlow, R.F. et al., Detection of Secondary Binding Sites in Proteins Using Fragment Screening. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-12-23

Peptides

SERINE PROTEASE NS3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

SERINE PROTEASE NS3

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