SMTL ID : 5ggx.1

Crystal Structure of Fe3+ - Desferal bound siderophore binding protein FhuD from Vibrio cholerae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-tetramer

Ligands

4 x DEF: DEFEROXAMINE MESYLATE FE(III) COMPLEX(Non-covalent)

DEF.1: 6 residues within 4Å: Chain A: W.49, R.65, F.174, W.202, W.256, Y.258 11 PLIP interactions: 8 interactions with chain A, 3 Ligand-Ligand interactions Hydrophobic interactions: A:W.49, A:W.49, A:W.256, A:W.256, A:W.256 Hydrogen bonds: A:R.65, A:R.65, A:Y.258 Metal complexes: DEF.1, DEF.1, DEF.1 DEF.2: 9 residues within 4Å: Chain B: W.24, W.49, R.65, R.166, F.174, W.202, I.204, W.256, Y.258 8 PLIP interactions: 5 interactions with chain B, 3 Ligand-Ligand interactions Hydrophobic interactions: B:W.49, B:F.174, B:W.202 Hydrogen bonds: B:R.65, B:R.65 Metal complexes: DEF.2, DEF.2, DEF.2 DEF.3: 7 residues within 4Å: Chain C: W.49, R.65, F.174, W.202, I.204, W.256, Y.258 13 PLIP interactions: 10 interactions with chain C, 3 Ligand-Ligand interactions Hydrophobic interactions: C:W.49, C:W.49, C:F.174, C:I.204, C:W.256, C:W.256, C:W.256 Hydrogen bonds: C:R.65, C:R.65, C:Y.258 Metal complexes: DEF.3, DEF.3, DEF.3 DEF.4: 8 residues within 4Å: Chain D: W.49, R.65, R.166, F.174, W.202, I.204, W.256, Y.258 13 PLIP interactions: 10 interactions with chain D, 3 Ligand-Ligand interactions Hydrophobic interactions: D:W.49, D:W.49, D:W.202, D:I.204, D:W.256, D:W.256, D:Y.258 Hydrogen bonds: D:R.65, D:Y.258, D:Y.258 Metal complexes: DEF.4, DEF.4, DEF.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agarwal, S. et al., Crystal Structure of Fe3+ - Desferal bound siderophore binding protein FhuD from Vibrio cholerae. To be published

Release Date

2017-02-22

Peptides

Iron(III) ABC transporter, periplasmic iron-compound-binding protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Iron(III) ABC transporter, periplasmic iron-compound-binding protein

Related Entries With Identical Sequence