SMTL ID : 5gnm.3 (3 other biounits)

Cytochrome P450 Vdh (CYP107BR1) L348M mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 28 residues within 4Å: Chain A: F.58, K.65, M.87, I.88, H.95, R.99, F.106, L.233, A.236, G.237, T.240, T.241, L.244, P.282, V.283, P.287, R.289, L.312, F.339, F.340, G.341, I.344, H.345, F.346, C.347, M.348, G.349, A.353 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:F.106, A:L.233, A:A.236, A:T.241, A:L.244, A:P.282, A:P.287, A:L.312, A:F.340, A:M.348 Water bridges: A:H.345 Salt bridges: A:K.65, A:H.95, A:R.99, A:R.289, A:H.345, A:H.345 pi-Stacking: A:F.340 Metal complexes: A:C.347

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yasutake, Y. et al., Structural insights into the mechanism of the drastic changes in enzymatic activity of the cytochrome P450 vitamin D3 hydroxylase (CYP107BR1) caused by a mutation distant from the active site. Acta Crystallogr F Struct Biol Commun (2017)

Release Date

2017-05-17

Peptides

Vitamin D(3) 25-hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Vitamin D(3) 25-hydroxylase

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