SMTL ID : 5gr8.2 (1 other biounit)

Crystal structure of PEPR1-AtPEP1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: N.392, G.416, S.440, R.463, E.464 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.440, A:S.440, A:E.464 NAG-NAG.2: 11 residues within 4Å: Chain A: H.199, F.221, G.223, N.224, D.245, Y.248 Chain B: K.7, V.8, S.9, S.10, G.11 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:V.8, B:S.10, B:S.10

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 3 residues within 4Å: Chain A: H.478, S.479, N.503 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.479 NAG.4: 7 residues within 4Å: Chain A: S.510, R.511, Y.530, N.532, S.534, D.556, T.578 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:D.556, A:T.578 Hydrogen bonds: A:S.510, A:N.532, A:S.534, A:D.556, A:D.556 NAG.5: 1 residues within 4Å: Chain A: N.29 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tang, J. et al., Structural basis for recognition of an endogenous peptide by the plant receptor kinase PEPR1. Cell Res. (2015)

Release Date

2016-12-14

Peptides

Leucine-rich repeat receptor-like protein kinase PEPR1: A
Elicitor peptide 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
P

Leucine-rich repeat receptor-like protein kinase PEPR1

Elicitor peptide 1

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