SMTL ID : 5guh.1

Crystal structure of silkworm PIWI-clade Argonaute Siwi bound to piRNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: Q.645, K.649, K.875, L.899 Chain B: U.1, U.3 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:L.899, H2O.2 MG.2: 4 residues within 4Å: Chain A: D.740, S.779, K.780, R.781 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsumoto, N. et al., Crystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA. Cell (2016)

Release Date

2016-10-19

Peptides

PIWI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PIWI