SMTL ID : 5h1w.1 (1 other biounit)

Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Mn2+ and L(+)-Erythrulose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x LER: L-Erythrulose(Non-covalent)

LER.1: 9 residues within 4Å: Chain A: E.169, L.171, E.175, D.202, H.205, H.228, R.234, E.263 Ligands: MN.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.205, A:R.234, A:R.234

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 5 residues within 4Å: Chain A: E.169, D.202, H.228, E.263 Ligands: LER.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.169, A:D.202, A:H.228, A:E.263

2 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.3: 8 residues within 4Å: Chain A: G.126, A.127, L.128, H.163, K.165, N.195, Y.225, R.258 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.163, A:K.165, A:K.165 Water bridges: A:Y.225, A:R.258 1PE.4: 8 residues within 4Å: Chain A: M.21, L.23, G.54, Q.56, F.279, K.283, I.286, I.287 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.283 Water bridges: A:Q.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shin, S.M. et al., TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions. Appl. Environ. Microbiol. (2017)

Release Date

2017-03-15

Peptides

Uncharacterized protein TM_0416: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein TM_0416

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