SMTL ID : 5h9d.1 (1 other biounit)

Crystal structure of Heptaprenyl Diphosphate Synthase from Staphylococcus aureus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.68 Å

Oligo State

hetero-1-1-1-mer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: G.40, K.41, H.75, L.79, R.92 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.41 Water bridges: A:H.75 Salt bridges: A:K.41, A:H.75, A:R.92 PO4.2: 4 residues within 4Å: Chain A: H.34, K.94, L.95, K.100 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.94, A:K.100 PO4.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Desai, J. et al., Structure, Function, and Inhibition of Staphylococcus aureus Heptaprenyl Diphosphate Synthase. ChemMedChem (2016)

Release Date

2016-12-28

Peptides

Farnesyl pyrophosphate synthetase: A
Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein: B
C-terminal peptide from Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
K

Farnesyl pyrophosphate synthetase

Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein

C-terminal peptide from Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein

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