- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.43 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x HCY: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 11 residues within 4Å:- Chain A: K.114, D.118
- Chain B: K.114, D.118
- Chain C: K.114, D.118
- Ligands: SO4.6, SO4.8, SO4.12, SO4.14, SO4.18
14 PLIP interactions:6 interactions with chain A, 3 interactions with chain C, 5 interactions with chain B- Water bridges: A:K.114, A:K.114, A:K.114, A:K.114, A:D.118, C:K.114, C:K.114, B:K.114, B:K.114, B:K.114, B:K.114
- Salt bridges: A:K.114, C:K.114, B:K.114
SO4.3: 5 residues within 4Å:- Chain A: R.113
- Chain B: R.113
- Chain C: R.113
- Ligands: SO4.9, SO4.15
3 PLIP interactions:1 interactions with chain A, 1 interactions with chain C, 1 interactions with chain B- Salt bridges: A:R.113, C:R.113, B:R.113
SO4.4: 4 residues within 4Å:- Chain A: K.242, G.243, K.244, M.245
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.243, A:M.245
- Water bridges: A:K.246
SO4.6: 7 residues within 4Å:- Chain A: K.114
- Ligands: SO4.2, SO4.8, BDG.11, SO4.12, SO4.14, SO4.18
6 PLIP interactions:3 interactions with chain A, 1 interactions with chain C, 2 interactions with chain B- Water bridges: A:K.114, A:K.114, C:K.114, B:K.114
- Salt bridges: A:K.114, B:K.114
SO4.8: 11 residues within 4Å:- Chain A: K.114, D.118
- Chain B: K.114, D.118
- Chain C: K.114, D.118
- Ligands: SO4.2, SO4.6, SO4.12, SO4.14, SO4.18
14 PLIP interactions:6 interactions with chain B, 3 interactions with chain A, 5 interactions with chain C- Water bridges: B:K.114, B:K.114, B:K.114, B:K.114, B:D.118, A:K.114, A:K.114, C:K.114, C:K.114, C:K.114, C:K.114
- Salt bridges: B:K.114, A:K.114, C:K.114
SO4.9: 5 residues within 4Å:- Chain A: R.113
- Chain B: R.113
- Chain C: R.113
- Ligands: SO4.3, SO4.15
3 PLIP interactions:1 interactions with chain A, 1 interactions with chain C, 1 interactions with chain B- Salt bridges: A:R.113, C:R.113, B:R.113
SO4.10: 4 residues within 4Å:- Chain B: K.242, G.243, K.244, M.245
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.243, B:M.245
- Water bridges: B:K.246
SO4.12: 7 residues within 4Å:- Chain B: K.114
- Ligands: SO4.2, SO4.6, SO4.8, SO4.14, BDG.17, SO4.18
6 PLIP interactions:1 interactions with chain A, 2 interactions with chain C, 3 interactions with chain B- Water bridges: A:K.114, C:K.114, B:K.114, B:K.114
- Salt bridges: C:K.114, B:K.114
SO4.14: 11 residues within 4Å:- Chain A: K.114, D.118
- Chain B: K.114, D.118
- Chain C: K.114, D.118
- Ligands: SO4.2, SO4.6, SO4.8, SO4.12, SO4.18
14 PLIP interactions:5 interactions with chain A, 6 interactions with chain C, 3 interactions with chain B- Water bridges: A:K.114, A:K.114, A:K.114, A:K.114, C:K.114, C:K.114, C:K.114, C:K.114, C:D.118, B:K.114, B:K.114
- Salt bridges: A:K.114, C:K.114, B:K.114
SO4.15: 5 residues within 4Å:- Chain A: R.113
- Chain B: R.113
- Chain C: R.113
- Ligands: SO4.3, SO4.9
3 PLIP interactions:1 interactions with chain A, 1 interactions with chain C, 1 interactions with chain B- Salt bridges: A:R.113, C:R.113, B:R.113
SO4.16: 4 residues within 4Å:- Chain C: K.242, G.243, K.244, M.245
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:G.243, C:M.245
- Water bridges: C:K.246
SO4.18: 7 residues within 4Å:- Chain C: K.114
- Ligands: SO4.2, BDG.5, SO4.6, SO4.8, SO4.12, SO4.14
6 PLIP interactions:3 interactions with chain C, 2 interactions with chain A, 1 interactions with chain B- Water bridges: C:K.114, C:K.114, A:K.114, B:K.114
- Salt bridges: C:K.114, A:K.114
- 3 x BDG: 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranose(Non-covalent)
BDG.5: 7 residues within 4Å:- Chain A: L.51, E.74, K.75, H.78, D.118
- Chain C: K.114
- Ligands: SO4.18
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:E.74, A:D.118, C:K.114
- Water bridges: A:L.51, A:D.118
- Salt bridges: A:H.78
BDG.11: 7 residues within 4Å:- Chain A: K.114
- Chain B: L.51, E.74, K.75, H.78, D.118
- Ligands: SO4.6
6 PLIP interactions:1 interactions with chain A, 5 interactions with chain B- Hydrogen bonds: A:K.114, B:E.74, B:D.118
- Water bridges: B:L.51, B:D.118
- Salt bridges: B:H.78
BDG.17: 7 residues within 4Å:- Chain B: K.114
- Chain C: L.51, E.74, K.75, H.78, D.118
- Ligands: SO4.12
6 PLIP interactions:5 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:E.74, C:D.118, B:K.114
- Water bridges: C:L.51, C:D.118
- Salt bridges: C:H.78
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vashchenko, G.V. et al., A Serpin structure. J.Biol.Chem. (2016)
- Release Date
- 2016-04-06
- Peptides
- Serpin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.43 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x HCY: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 3 x BDG: 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vashchenko, G.V. et al., A Serpin structure. J.Biol.Chem. (2016)
- Release Date
- 2016-04-06
- Peptides
- Serpin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A