SMTL ID : 5hp5.2 (1 other biounit)

Srtucture of human peptidylarginine deiminase type I (PAD1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 7 residues within 4Å: Chain A: D.176, D.178, D.200, K.385, P.410, D.411 Ligands: CA.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.178, A:D.178, A:D.200, A:D.200 CA.2: 7 residues within 4Å: Chain A: N.174, D.176, D.178, D.186, D.197, D.200 Ligands: CA.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.176, A:D.178, A:D.186, A:D.197, A:D.200 CA.3: 4 residues within 4Å: Chain A: Q.372, E.376, F.430, L.433 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.376, A:F.430, A:L.433, H2O.1, H2O.1 CA.4: 5 residues within 4Å: Chain A: E.374, D.392, S.393, N.396, K.400 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.392, A:D.392, A:S.393, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saijo, S. et al., Monomeric Form of Peptidylarginine Deiminase Type I Revealed by X-ray Crystallography and Small-Angle X-ray Scattering. J.Mol.Biol. (2016)

Release Date

2016-07-27

Peptides

Protein-arginine deiminase type-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein-arginine deiminase type-1

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