SMTL ID : 5hun.1

The crystal structure of neuraminidase from A/gyrfalcon/Washington/41088-6/2014 influenza virus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: D.222, G.226, D.252, G.273, Y.274, G.275 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.222, A:G.226, A:D.252, A:Y.274, H2O.3 CA.2: 6 residues within 4Å: Chain B: D.222, G.226, D.252, G.273, Y.274, G.275 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.222, B:G.226, B:D.252, B:Y.274, H2O.7 CA.3: 6 residues within 4Å: Chain C: D.222, G.226, D.252, G.273, Y.274, G.275 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.222, C:G.226, C:D.252, C:Y.274, H2O.10 CA.4: 6 residues within 4Å: Chain D: D.222, G.226, D.252, G.273, Y.274, G.275 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:D.222, D:G.226, D:D.252, D:Y.274, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, H. et al., Molecular Characterizations of Surface Proteins Hemagglutinin and Neuraminidase from Recent H5Nx Avian Influenza Viruses. J.Virol. (2016)

Release Date

2016-04-13

Peptides

Neuraminidase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Neuraminidase