SMTL ID : 5i4q.1

Contact-dependent inhibition system from Escherichia coli NC101 - ternary CdiA/CdiI/EF-Tu complex (domains 2 and 3)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-2-2-2-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 1 residues within 4Å: Chain A: A.70 Ligand excluded by PLIP CL.3: 1 residues within 4Å: Chain D: A.70 Ligand excluded by PLIP

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain C: Y.150, R.151 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:R.151 SO4.4: 2 residues within 4Å: Chain F: Y.150, R.151 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:R.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michalska, K. et al., Structure of a novel antibacterial toxin that exploits elongation factor Tu to cleave specific transfer RNAs. Nucleic Acids Res. (2017)

Release Date

2017-06-28

Peptides

Contact-dependent inhibitor A: AD
Contact-dependent inhibitor I: BE
Elongation factor Tu: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

B
B

E
B

C
C

F
C

Contact-dependent inhibitor A

Contact-dependent inhibitor I

Elongation factor Tu

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