SMTL ID : 5i5p.1 (1 other biounit)

Crystal structure of a marine metagenome TRAP solute binding protein specific for aromatic acid ligands (Sorcerer II Global Ocean Sampling Expedition, unidentified microbe, locus tag GOS_1523157) in complex with co-purified 4-hydroxybenzoate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x PHB: P-HYDROXYBENZOIC ACID(Non-covalent)

PHB.1: 16 residues within 4Å: Chain A: F.32, P.33, S.39, W.89, V.91, Y.94, H.144, R.168, P.170, V.190, V.207, P.208, E.210, I.211, F.238, W.274 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.89, A:V.91, A:V.190, A:P.208, A:I.211, A:I.211, A:I.211, A:F.238 Hydrogen bonds: A:Y.94, A:Y.94, A:V.190 Salt bridges: A:R.168

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 8 residues within 4Å: Chain A: K.42, F.43, P.46, W.47, K.50, L.266, L.269, L.273 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.50

3 x BR: BROMIDE ION(Non-covalent)

BR.3: 5 residues within 4Å: Chain A: K.148, W.209, T.226, R.282, I.292 Ligand excluded by PLIP BR.4: 4 residues within 4Å: Chain A: P.73, P.189, P.191, A.192 Ligand excluded by PLIP BR.5: 5 residues within 4Å: Chain A: T.151, K.152, E.153, K.154, D.203 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Crystal structure of a marine metagenome TRAP solute binding protein specific for aromatic acid ligands (Sorcerer II Global Ocean Sampling Expedition, unidentified microbe, locus tag GOS_1523157) in complex with co-purified 4-hydroxybenzoate. To Be Published

Release Date

2017-01-18

Peptides

TRAP TRANSPORTER SOLUTE BINDING PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRAP TRANSPORTER SOLUTE BINDING PROTEIN

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