- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.22 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CU: COPPER (II) ION(Non-covalent)
- 3 x NO: NITRIC OXIDE(Non-covalent)
NO.3: 7 residues within 4Å:- Chain A: D.91, H.93, H.128
- Chain C: H.248, I.250, H.299
- Ligands: CU.2
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:H.128, C:H.248
NO.12: 7 residues within 4Å:- Chain A: H.248, I.250, H.299
- Chain B: D.91, H.93, H.128
- Ligands: CU.11
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:H.299, B:D.91
NO.21: 7 residues within 4Å:- Chain B: H.248, I.250, H.299
- Chain C: D.91, H.93, H.128
- Ligands: CU.20
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:H.128, B:H.248
- 18 x NO2: NITRITE ION(Non-covalent)
NO2.4: 2 residues within 4Å:- Chain A: D.181, K.187
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.182, A:K.187
NO2.5: 5 residues within 4Å:- Chain A: R.243, D.244
- Chain C: R.246, N.300
- Ligands: NO2.27
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:D.244, C:R.246
- Water bridges: A:R.243, A:D.244
NO2.6: 2 residues within 4Å:- Chain A: T.164, R.233
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.233, A:R.233
- Water bridges: A:T.164
NO2.7: 7 residues within 4Å:- Chain A: Q.271
- Chain B: W.258, A.259, T.260, G.261, K.262, N.265
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:T.260, B:K.262, B:N.265, A:Q.271
- Water bridges: B:V.257, B:V.257, B:A.259
NO2.8: 4 residues within 4Å:- Chain A: K.118, T.120
- Chain C: R.289, L.323
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: A:K.118, C:R.289, C:R.289
NO2.9: 5 residues within 4Å:- Chain A: R.243, R.246, N.300, E.303
- Ligands: NO2.14
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.243, A:R.246, A:R.246, A:N.300
NO2.13: 2 residues within 4Å:- Chain B: D.181, K.187
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.182, B:K.187
NO2.14: 5 residues within 4Å:- Chain A: R.246, N.300
- Chain B: R.243, D.244
- Ligands: NO2.9
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:D.244, A:R.246
- Water bridges: B:R.243, B:D.244
NO2.15: 2 residues within 4Å:- Chain B: T.164, R.233
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.233, B:R.233
- Water bridges: B:T.164
NO2.16: 7 residues within 4Å:- Chain B: Q.271
- Chain C: W.258, A.259, T.260, G.261, K.262, N.265
7 PLIP interactions:1 interactions with chain B, 6 interactions with chain C- Hydrogen bonds: B:Q.271, C:T.260, C:K.262, C:N.265
- Water bridges: C:V.257, C:V.257, C:A.259
NO2.17: 4 residues within 4Å:- Chain A: R.289, L.323
- Chain B: K.118, T.120
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:R.289, A:R.289, B:K.118
- Water bridges: A:D.322
NO2.18: 5 residues within 4Å:- Chain B: R.243, R.246, N.300, E.303
- Ligands: NO2.23
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.243, B:R.246, B:R.246, B:N.300
NO2.22: 2 residues within 4Å:- Chain C: D.181, K.187
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:E.182, C:K.187
NO2.23: 5 residues within 4Å:- Chain B: R.246, N.300
- Chain C: R.243, D.244
- Ligands: NO2.18
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain C- Hydrogen bonds: B:R.246, C:D.244
- Water bridges: C:R.243, C:D.244
NO2.24: 2 residues within 4Å:- Chain C: T.164, R.233
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:R.233, C:R.233
- Water bridges: C:T.164
NO2.25: 7 residues within 4Å:- Chain A: W.258, A.259, T.260, G.261, K.262, N.265
- Chain C: Q.271
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:K.262, A:N.265, C:Q.271
- Water bridges: A:V.257, A:V.257, A:A.259
NO2.26: 4 residues within 4Å:- Chain B: R.289, L.323
- Chain C: K.118, T.120
4 PLIP interactions:1 interactions with chain C, 3 interactions with chain B- Hydrogen bonds: C:K.118, B:R.289, B:R.289
- Water bridges: B:D.322
NO2.27: 5 residues within 4Å:- Chain C: R.243, R.246, N.300, E.303
- Ligands: NO2.5
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:R.243, C:R.246, C:R.246, C:N.300
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Horrell, S. et al., Serial crystallography captures enzyme catalysis in copper nitrite reductase at atomic resolution from one crystal. Iucrj (2016)
- Release Date
- 2016-07-13
- Peptides
- Copper-containing nitrite reductase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.22 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CU: COPPER (II) ION(Non-covalent)
- 3 x NO: NITRIC OXIDE(Non-covalent)
- 18 x NO2: NITRITE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Horrell, S. et al., Serial crystallography captures enzyme catalysis in copper nitrite reductase at atomic resolution from one crystal. Iucrj (2016)
- Release Date
- 2016-07-13
- Peptides
- Copper-containing nitrite reductase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A