SMTL ID : 5if5.1 (1 other biounit)

Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to EBSI-39 (2,3-dichlorophenyl)methanol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 6 residues within 4Å: Chain A: K.29, I.213, N.214, L.217, F.268, T.318 No protein-ligand interaction detected (PLIP)

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: W.65, K.66, E.67, P.68, L.90 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.66, A:W.86 EDO.3: 3 residues within 4Å: Chain A: K.29, S.396, L.397 5 PLIP interactions: 5 interactions with chain A Water bridges: A:N.214, A:N.214, A:T.318, A:K.322, A:L.397 EDO.4: 3 residues within 4Å: Chain A: Q.156, F.159, W.454 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.156, A:K.391, A:K.391

1 x 6B0: (2,3-dichlorophenyl)methanol(Non-covalent)

6B0.5: 6 residues within 4Å: Chain A: M.59, W.65, L.90, L.93, Q.94, E.97 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.90, A:L.93, A:Q.94 Halogen bonds: A:M.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pierce, P. et al., Fragment screening by STD NMR identifies novel site binders against influenza A virus polymerase PA. To Be Published

Release Date

2017-03-08

Peptides

Polymerase acidic protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polymerase acidic protein

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