SMTL ID : 5if6.4 (5 other biounits)

Structure of a computationally designed 17-OHP binder

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 3QZ: (9beta)-17-hydroxypregn-4-ene-3,20-dione(Non-covalent)

3QZ.1: 22 residues within 4Å: Chain A: L.12, G.13, T.16, W.24, I.34, T.36, T.43, F.59, H.63, I.64, V.69, V.71, L.89, A.91, A.93, S.101, V.103, F.107, Y.109, L.120, Y.124, M.129 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.24, A:V.69, A:V.71, A:A.91, A:V.103, A:F.107

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: S.9, Q.10, C.73, L.89 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dou, J. et al., Sampling and energy evaluation challenges in ligand binding protein design. Protein Sci. (2017)

Release Date

2017-03-01

Peptides

OHP9_1c: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

OHP9_1c

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