SMTL ID : 5igm.1

Crystal structure of the bromodomain of human BRD9 in complex with bromosporine (BSP)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x BMF: Bromosporine(Non-covalent)

BMF.1: 11 residues within 4Å: Chain A: G.32, F.33, F.34, F.36, P.37, V.38, I.42, A.43, Y.88, N.89, Y.95 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.34, A:V.38, A:I.42, A:Y.95 Hydrogen bonds: A:G.32, A:F.36, A:N.89, A:N.89 pi-Stacking: A:F.33, A:Y.95 BMF.2: 7 residues within 4Å: Chain B: F.33, F.34, V.38, I.42, Y.88, N.89, Y.95 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.34, B:V.38, B:I.42, B:Y.88 Hydrogen bonds: B:N.89, B:N.89, B:Y.95 pi-Stacking: B:Y.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Picaud, S. et al., Promiscuous targeting of bromodomains by bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia. Sci Adv (2016)

Release Date

2016-10-19

Peptides

Bromodomain-containing protein 9: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bromodomain-containing protein 9

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