SMTL ID : 5iid.1 (1 other biounit)

Crystal Structure of the fifth bromodomain of human polybromo (PB1) in complex with 2-(3,4-dihydroxyphenyl)-5-hydroxy-4H-chromen-4-one

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x 6BK: 2-(3,4-dihydroxyphenyl)-5-hydroxy-4H-1-benzopyran-4-one(Non-covalent)

6BK.1: 11 residues within 4Å: Chain A: I.41, F.42, L.45, P.46, Y.54, M.62, D.63, M.89, A.93, N.97, I.103 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.41, A:L.45, A:L.45, A:P.46, A:D.63, A:I.103 Hydrogen bonds: A:N.97 pi-Stacking: A:F.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Myrianthopoulos, V. et al., Discovery and Optimization of a Selective Ligand for the Switch/Sucrose Nonfermenting-Related Bromodomains of Polybromo Protein-1 by the Use of Virtual Screening and Hydration Analysis. J.Med.Chem. (2016)

Release Date

2016-06-29

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein polybromo-1

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