SMTL ID : 5ikg.1

Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 25 residues within 4Å: Chain A: E.159, F.161, F.163, L.164, D.165, G.166, I.167, A.168, L.216, Q.218, V.250, R.252, H.301, I.302, T.305, R.306, R.308, R.329, F.356, F.367, L.370, Q.371, I.394, I.395, V.423 34 PLIP interactions: 34 interactions with chain A, Hydrophobic interactions: A:F.161, A:F.163, A:A.168, A:L.216, A:L.216, A:Q.218, A:V.250, A:I.302, A:T.305, A:R.306, A:F.356, A:F.356, A:F.356, A:F.367, A:L.370, A:L.370, A:I.394, A:I.395, A:V.423 Hydrogen bonds: A:D.165, A:G.166, A:I.167, A:A.168 Water bridges: A:A.168, A:R.252, A:R.306, A:R.306, A:R.308 Salt bridges: A:R.252, A:R.306, A:R.308, A:R.329 pi-Cation interactions: A:R.329 Metal complexes: A:H.301

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Linde, D. et al., Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase. Catalysis Science And Technology (2016)

Release Date

2016-07-13

Peptides

Dye-decolorizing peroxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dye-decolorizing peroxidase