SMTL ID : 5ix8.2 (1 other biounit)

Crystal structure of sugar ABC transport system, substrate-binding protein from Bordetella parapertussis 12822

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.220, E.243, R.245 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.243 Water bridges: A:R.220, A:R.220 Salt bridges: A:R.220, A:R.245 SO4.2: 5 residues within 4Å: Chain A: A.150, G.151, L.152, E.153, R.156 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.151, A:L.152, A:E.153 Water bridges: A:A.149, A:E.153 Salt bridges: A:R.156 SO4.3: 3 residues within 4Å: Chain A: A.185, M.188, R.217 3 PLIP interactions: 3 interactions with chain A Water bridges: A:A.189, A:R.217 Salt bridges: A:R.217 SO4.4: 4 residues within 4Å: Chain A: P.9, I.10, V.11, R.13 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.11 Salt bridges: A:R.13

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 4 residues within 4Å: Chain A: A.56, Y.57, E.181, F.210 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.57, A:E.181 EDO.6: 2 residues within 4Å: Chain A: R.2, P.9 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.2, A:R.2 Water bridges: A:E.40, A:E.40, A:R.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, C. et al., Crystal structure of sugar ABC transport system, substrate-binding protein from Bordetella parapertussis 12822. To Be Published

Release Date

2016-04-06

Peptides

Putative sugar ABC transport system, substrate-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Putative sugar ABC transport system, substrate-binding protein

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