SMTL ID : 5j54.1

The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

1 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: H.167, H.218, H.284, H.476 Ligands: OXY.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.167, A:H.218, A:H.284, A:H.476

1 x OXY: OXYGEN MOLECULE(Non-covalent)

OXY.2: 7 residues within 4Å: Chain A: T.121, H.218, H.284, L.475, H.476 Ligands: FE.1, STL.3 No protein-ligand interaction detected (PLIP)

1 x STL: RESVERATROL(Non-covalent)

STL.3: 20 residues within 4Å: Chain A: F.59, Y.101, R.102, N.120, T.121, K.134, E.135, M.216, H.218, F.281, S.283, H.284, M.306, F.307, E.353, F.354, M.392, F.473, L.475 Ligands: OXY.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.59, A:F.59, A:F.354 Hydrogen bonds: A:Y.101, A:K.134, A:S.283, A:E.353 Water bridges: A:E.135, A:S.283 pi-Stacking: A:F.59, A:F.307

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McAndrew, R.P. et al., Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase. Proc. Natl. Acad. Sci. U.S.A. (2016)

Release Date

2016-11-30

Peptides

Carotenoid oxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carotenoid oxygenase

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