SMTL ID : 5jx0.1 (1 other biounit)

Temperature sensitive D4 mutant L110F

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: G.86, I.87, D.88, P.89, Y.90, P.98, F.99, S.108, N.140 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.88, A:Y.90, A:F.99, A:S.108, A:S.108, A:N.140 Water bridges: A:V.97 GOL.3: 9 residues within 4Å: Chain B: G.86, D.88, P.89, Y.90, P.98, F.99, S.108, N.140, H.201 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Y.90, B:F.99, B:S.108, B:S.108, B:N.140, B:N.140 Water bridges: B:I.87

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: G.179, K.180, Y.200, H.201 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain B: G.179, K.180, Y.200, H.201 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schormann, N. et al., Poxvirus uracil-DNA glycosylase-An unusual member of the family I uracil-DNA glycosylases. Protein Sci. (2016)

Release Date

2017-02-08

Peptides

Uracil-DNA glycosylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uracil-DNA glycosylase

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