SMTL ID : 5jy3.1 (1 other biounit)

CRYSTAL STRUCTURE OF LXRbeta (NUCLEAR RECEPTOR SUBFAMILY 1, GROUP H, MEMBER 2) COMPLEXED WITH BMS-852927

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x 6OX: 2-[2-[2-[2,6-bis(chloranyl)phenyl]propan-2-yl]-1-[2-fluoranyl-4-[3-fluoranyl-4-(hydroxymethyl)-5-methylsulfonyl-phenyl] phenyl]imidazol-4-yl]propan-2-ol(Non-covalent)

6OX.1: 18 residues within 4Å: Chain A: F.71, F.74, T.75, L.77, A.78, I.80, S.81, E.84, M.115, E.118, T.119, R.122, F.132, L.133, F.143, L.148, F.152, I.156 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.74, A:A.78, A:T.119, A:F.132, A:F.143, A:F.152 Hydrogen bonds: A:E.84 pi-Stacking: A:F.132 6OX.2: 23 residues within 4Å: Chain B: F.71, F.74, T.75, L.77, A.78, I.80, S.81, E.84, I.112, M.115, E.118, T.119, R.122, F.132, L.133, F.143, L.148, F.152, H.238, L.245, L.252, W.260 Ligands: BU1.3 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:F.71, B:A.78, B:T.119, B:F.132, B:F.132, B:F.143, B:L.148, B:L.252, B:W.260, B:W.260 Hydrogen bonds: B:E.84 Water bridges: B:Q.241 pi-Stacking: B:F.132, B:W.260

1 x BU1: 1,4-BUTANEDIOL(Non-functional Binders)

BU1.3: 8 residues within 4Å: Chain B: Q.38, C.41, N.42, E.84, F.88, E.118, I.177 Ligands: 6OX.2 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:F.88, B:E.118, B:I.177 Hydrogen bonds: B:Q.38, B:E.84, B:E.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kick, E.K. et al., Discovery of Highly Potent Liver X Receptor beta Agonists. ACS Med Chem Lett (2016)

Release Date

2016-11-02

Peptides

Oxysterols receptor LXR-beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oxysterols receptor LXR-beta

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