SMTL ID : 5k16.3 (2 other biounits)

Crystal structure of free Ubiquitin-specific protease 12

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.171, C.174, C.218, C.221 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.171, A:C.174, A:C.218, A:C.221 ZN.3: 4 residues within 4Å: Chain B: C.171, C.174, C.218, C.221 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.171, B:C.174, B:C.218, B:C.221

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: I.177, S.178, S.179 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.179, A:S.179 GOL.4: 5 residues within 4Å: Chain B: F.29, K.89, I.92, T.93, R.96 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.89, B:R.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H. et al., Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20. Mol.Cell (2016)

Release Date

2016-07-20

Peptides

Ubiquitin carboxyl-terminal hydrolase 12: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin carboxyl-terminal hydrolase 12

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